STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_057220Arginine decarboxylase. (1227 aa)    
Predicted Functional Partners:
BESB_053010
Putative acyl-CoA carboxyltransferase beta chain.
   
 0.832
BESB_071620
Spc97 / Spc98 family protein.
   
 0.818
BESB_000620
Spc97 / Spc98 family protein.
   
 0.763
BESB_024100
Uncharacterized protein.
    
 0.729
BESB_022320
Tubulin/FtsZ family, GTPase domain-containing protein; Belongs to the tubulin family.
   
 0.712
BESB_059730
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.712
BESB_083790
Tetratricopeptide repeat-containing protein.
    
 0.703
BESB_047850
Uncharacterized protein.
    
 0.703
BESB_010400
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.633
BESB_009620
Thioredoxin domain-containing protein.
   
 0.622
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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