STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_009300SWIB/MDM2 domain-containing protein. (1306 aa)    
Predicted Functional Partners:
BESB_054120
Uncharacterized protein.
   
 0.960
BESB_067270
Uncharacterized protein.
    
 0.950
BESB_082110
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.822
BESB_027810
Putative SWI2/SNF2 Brahma-like.
   
 0.784
BESB_023580
Uncharacterized protein.
   
 0.784
BESB_023850
Uncharacterized protein.
   
 0.784
BESB_043470
Putative SWI2/SNF2 Brahma-like.
   
 0.784
BESB_080590
Uncharacterized protein.
   
 0.784
BESB_053850
Glycosyl hydrolases family 17 protein; Belongs to the glycosyl hydrolase 17 family.
   
 0.784
BESB_009400
Uncharacterized protein.
   
 0.784
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.