STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_052810WD domain, G-beta repeat-containing protein. (873 aa)    
Predicted Functional Partners:
BESB_033110
LisH protein.
    
 
 0.978
BESB_014380
Uncharacterized protein.
   
 
 0.930
BESB_011320
SPRY domain-containing protein.
   
 
 0.930
BESB_019030
HECT domain-containing protein.
   
  
 0.928
BESB_059950
Protein yippee-like; Belongs to the yippee family.
   
 
 0.914
BESB_079390
Zinc finger, C3HC4 type (RING finger) domain-containing protein.
   
 
 0.871
BESB_079380
CLTH domain-containing protein.
   
 
 0.871
BESB_048670
CTLH domain-containing protein.
    
 
 0.804
BESB_056300
Histone deacetylase complex subunit Sin3.
    
 
 0.705
BESB_059430
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.673
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.