STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_044080Splicing factor U2AF family SnRNP auxilary factor large subunit, RRM domain-containing protein. (454 aa)    
Predicted Functional Partners:
BESB_036490
Putative U2 snRNP auxiliary factor.
   
 0.985
BESB_054550
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
  
  
  0.946
BESB_070940
Splicing factor U2AF protein.
  
  
 
0.940
BESB_033580
Myb family DNA-binding domain-containing protein.
   
 0.852
BESB_075380
Zinc knuckle domain-containing protein.
   
 
 0.821
BESB_051620
Putative U2 small nuclear ribonucleoprotein family protein.
   
 
 0.819
BESB_053830
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.818
BESB_030090
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.815
BESB_051490
RNA recognition motif-containing protein.
   
 0.815
BESB_061930
SPOC domain-containing protein.
   
 0.815
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.