STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_055080GIY-YIG domain-containing protein. (1252 aa)    
Predicted Functional Partners:
BESB_029200
3'-5' exonuclease domain-containing protein.
    
 0.990
BESB_066620
Aspartate-tRNA ligase.
   
 0.927
BESB_053540
Asparaginyl-tRNA synthetase (NOB+tRNA synthase).
   
 0.927
BESB_002290
ERCC4 domain-containing protein.
   
 0.893
BESB_017590
ERCC4 domain-containing protein.
   
 0.876
BESB_004290
DNA repair protein rad10 subfamily protein.
   
 0.859
BESB_018170
ATP-dependent DNA helicase, RecQ family protein.
    
 0.851
BESB_048180
ATP-dependent DNA helicase, RecQ family protein.
    
 0.851
BESB_038190
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
     
 0.786
BESB_005400
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 
 0.766
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.