STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_005400Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (2592 aa)    
Predicted Functional Partners:
BESB_049410
DNA_mis_repair domain-containing protein.
   
 0.959
BESB_036840
Uncharacterized protein.
   
 0.920
BESB_002290
ERCC4 domain-containing protein.
    
 0.818
BESB_017590
ERCC4 domain-containing protein.
    
 0.802
BESB_055080
GIY-YIG domain-containing protein.
   
 
 0.766
BESB_004290
DNA repair protein rad10 subfamily protein.
     
 0.746
BESB_029200
3'-5' exonuclease domain-containing protein.
   
 
 0.724
BESB_020380
DNA repair metallo-beta-lactamase.
    
 0.697
BESB_066620
Aspartate-tRNA ligase.
   
 
 0.623
BESB_053540
Asparaginyl-tRNA synthetase (NOB+tRNA synthase).
   
 
 0.623
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
Server load: low (24%) [HD]