STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_010310Putative splicing factor 3b, subunit 3. (1236 aa)    
Predicted Functional Partners:
BESB_025650
Putative pre-mRNA branch site protein p14.
    
 0.999
BESB_075410
Putative pre-mRNA splicing factor subunit.
   
 0.999
BESB_080300
DEAD/DEAH box helicase domain-containing protein.
   
 0.999
BESB_080080
Putative splicesome-associated protein.
   
 0.999
BESB_075490
PSP protein.
   
 0.999
BESB_051620
Putative U2 small nuclear ribonucleoprotein family protein.
   
 0.999
BESB_052420
Putative crooked neck family 1 protein isoform 2.
  
 
 0.999
BESB_058940
Putative splicing factor 3A subunit 2.
   
 0.999
BESB_041030
LSM domain-containing protein.
   
 0.999
BESB_062070
RNA recognition motif-containing protein.
   
 0.999
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.