STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_047820FHA domain-containing protein. (1175 aa)    
Predicted Functional Partners:
BESB_077290
NOT2 / NOT3 / NOT5 family protein.
   
 
 0.844
BESB_021520
UBX domain-containing protein.
   
 
 0.836
BESB_068950
Peptidylprolyl isomerase.
    
 
 0.812
BESB_056870
Zinc finger, C3HC4 type (RING finger) domain-containing protein.
    
 
 0.705
BESB_024220
Cell division protein CDC48AP.
    
 
 0.674
BESB_037270
ATPase, AAA family protein.
    
 
 0.674
BESB_038290
Cell division protein CDC48CY.
    
 
 0.674
BESB_028860
Ubiquitin-conjugating enzyme subfamily protein.
    
 
 0.650
BESB_022990
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.650
BESB_026690
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.578
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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