STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_00158060S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (183 aa)    
Predicted Functional Partners:
BESB_030020
Ribosomal protein RPS10.
   
 
 0.999
BESB_024840
Ribosomal protein RPL13A.
   
 0.999
BESB_020500
Ribosomal protein RPL19.
 
 
 0.999
BESB_021200
Ribosomal protein RPL10.
   
 0.999
BESB_022260
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.999
BESB_082170
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.999
BESB_085470
Ribosomal protein RPP1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
  
 0.999
BESB_081540
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 
 0.999
BESB_082580
Ribosomal protein RPL22.
   
 0.999
BESB_033190
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.