STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_040380HMG (High mobility group) box domain-containing protein. (98 aa)    
Predicted Functional Partners:
BESB_006430
BSD domain-containing protein.
    
 0.851
BESB_053030
TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.846
BESB_049780
General transcription factor IIH polypeptide 3 GTF2H3.
    
 0.844
BESB_040950
Histone H2A; Belongs to the histone H2A family.
   
 0.840
BESB_026280
General transcription factor IIH polypeptide 2 GTF2H2.
    
 0.832
BESB_006680
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.826
BESB_005210
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 0.794
BESB_035510
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.789
BESB_063160
RuvB-like helicase; Belongs to the RuvB family.
    
 0.786
BESB_040140
RuvB-like helicase; Belongs to the RuvB family.
    
 0.786
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.