STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_003340SAM_MT_RSMB_NOP domain-containing protein. (783 aa)    
Predicted Functional Partners:
BESB_004440
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
  0.910
BESB_006230
Uncharacterized protein.
   
 
 0.777
BESB_015900
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.775
BESB_085410
Noc2p family protein.
   
 
 0.771
BESB_034580
RNA recognition motif-containing protein.
   
 
 0.766
BESB_071360
NLE (NUC135) domain-containing protein.
   
 
 0.762
BESB_037480
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
  
 
 0.761
BESB_028930
Putative IMP4 family U3 small nucleolar ribonucleoprotein (snoRNP).
   
 
 0.760
BESB_080040
Brix domain-containing protein.
   
 
 0.754
BESB_061100
Uncharacterized protein.
   
 
 0.747
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.