STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_003210Carbonate dehydratase, eukaryotic-type domain-containing protein. (770 aa)    
Predicted Functional Partners:
BESB_043830
Ribosomal protein RPL5.
    
 
 0.812
BESB_009060
Brix domain-containing protein.
   
 
 0.812
BESB_043440
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.728
BESB_071240
Ribosomal protein RPL11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.697
BESB_007580
Brix domain-containing protein.
   
    0.668
BESB_073160
WD domain, G-beta repeat-containing protein.
   
  
 0.639
BESB_075300
Uncharacterized protein.
   
  
 0.551
BESB_085720
Putative proliferation-associated protein 2G4.
   
  
 0.548
BESB_023090
Ubiquitin-conjugating enzyme subfamily protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.546
BESB_026660
Putative periodic tryptophan protein PWP2.
   
    0.541
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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