STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lste_2560Inner membrane protein. (544 aa)    
Predicted Functional Partners:
Lste_3134
Regulatory protein (GGDEF domain).
 
   
 0.950
Lste_0957
GGDEF/EAL domain-containing sensory box protein.
   
 0.949
Lste_2253
Regulatory protein (GGDEF, PAS, PAC domains).
 
   
 0.791
Lste_1361
Two component response regulator with GGDEF domain protein.
 
   
 0.781
Lste_2599
Regulatory protein (GGDEF domain).
 
   
 0.779
Lste_2561
Succinylglutamate desuccinylase / aspartoacylase family protein.
       0.535
Lste_2846
Regulatory protein (GGDEF and EAL domains).
  
   
0.520
Lste_1045
Regulatory protein (GGDEF domain).
  
   
0.518
Lste_2559
Hypothetical protein.
       0.452
Your Current Organism:
Legionella steelei
NCBI taxonomy Id: 947033
Other names: ATCC BAA-2169, IMNS3376, IMVS 3113, IMVS-3376, L. steelei, Legionella sp. IMVS-3376, Legionella steelei Edelstein et al. 2012
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.