STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_00650-1Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (292 aa)    
Predicted Functional Partners:
RvY_01767-1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.832
RvY_15948
Sod_Cu domain-containing protein.
  
0.810
RvY_15948-2
HMA domain-containing protein.
  
0.806
RvY_06597-1
DJ-1_PfpI domain-containing protein.
  
 0.762
RvY_15964-3
DJ-1_PfpI domain-containing protein.
  
 0.762
RvY_15964-2
DJ-1_PfpI domain-containing protein.
  
 0.762
RvY_07802-1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.758
RvY_10061-1
HSP70-6; Belongs to the heat shock protein 70 family.
   
 0.709
RvY_03920-1
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
  
 0.678
RvY_06411-1
Catalase2.
  
 0.678
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.