STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_00579-1S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (277 aa)    
Predicted Functional Partners:
RvY_00677-1
Uncharacterized protein.
   
 
 0.999
RvY_01164
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
RvY_01605-1
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
RvY_01164-2
S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
RvY_01330-1
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
RvY_01600-1
Ribosomal_L16 domain-containing protein.
  
 
 0.999
RvY_00064-1
KH domain-containing protein.
   
 0.999
RvY_00120-2
Uncharacterized protein.
   
 
 0.999
RvY_00564-1
Ubiquitin-like domain-containing protein.
   
 0.999
RvY_00639-1
Uncharacterized protein.
  
 
 0.999
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (24%) [HD]