STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_00753-1tRNA_int_endo domain-containing protein. (65 aa)    
Predicted Functional Partners:
RvY_05094-1
Uncharacterized protein.
    
 0.816
RvY_15533-1
tRNA_int_endo domain-containing protein.
    
 0.816
RvY_12722-1
Uncharacterized protein.
    
 0.666
RvY_14311
CLP1_P domain-containing protein.
    
 0.666
RvY_14311-1
CLP1_P domain-containing protein.
    
 0.666
RvY_05486-1
Uncharacterized protein.
    
   0.616
RvY_05911-1
THUMP domain-containing protein.
    
   0.616
RvY_08486-1
Uncharacterized protein.
    
   0.616
RvY_11031-1
Uncharacterized protein.
    
   0.616
RvY_12723-1
RRM domain-containing protein.
     
 0.424
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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