STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_01560-1G_PROTEIN_RECEP_F1_2 domain-containing protein. (350 aa)    
Predicted Functional Partners:
RvY_07472-1
Uncharacterized protein.
    
 0.659
RvY_05530
Uncharacterized protein.
    
 0.615
RvY_05530-1
Uncharacterized protein.
    
 0.615
RvY_05530-2
Uncharacterized protein.
    
 0.615
RvY_06548-1
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.600
RvY_11015-1
Arrestin_C domain-containing protein.
    
 0.571
RvY_00243-1
Ig-like domain-containing protein.
    
 0.529
RvY_00240-1
Fibronectin type-III domain-containing protein.
    
 0.529
RvY_00244
Uncharacterized protein.
    
 0.529
RvY_00244-1
Uncharacterized protein.
    
 0.529
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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