STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_01835-1Beta-lactamase domain-containing protein. (625 aa)    
Predicted Functional Partners:
RvY_11493-1
Uncharacterized protein.
    
 0.784
RvY_05718-1
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.774
RvY_01927-1
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.757
RvY_03021-1
DRIM domain-containing protein.
   
 0.716
RvY_10699-3
Uncharacterized protein.
   
 0.701
RvY_00736-1
Peptidase_M28 domain-containing protein.
  
 0.692
RvY_00737-1
TFR_dimer domain-containing protein.
  
 0.692
RvY_15604-1
Uncharacterized protein.
   
 0.685
RvY_18605-1
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.676
RvY_00342-1
WD_REPEATS_REGION domain-containing protein.
    
  0.675
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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