STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_01879-3Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (150 aa)    
Predicted Functional Partners:
RvY_09603-1
Uncharacterized protein.
   
 0.816
RvY_14320-1
PRKCSH_1 domain-containing protein.
   
 0.816
RvY_13810-1
PRKCSH-like domain-containing protein.
   
 0.816
RvY_12889-1
Uncharacterized protein.
    
 0.790
RvY_06966-1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.723
RvY_17829-1
Uncharacterized protein.
    
 0.707
RvY_08360-1
Uncharacterized protein.
   
 0.694
RvY_08513-1
Uncharacterized protein.
   
 0.694
RvY_08361-1
Glyco_hydro_63 domain-containing protein.
   
 0.694
RvY_00894-1
Nup54 domain-containing protein.
    
 0.685
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.