STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_01075-1Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (234 aa)    
Predicted Functional Partners:
RvY_09753-1
Uncharacterized protein.
    
  0.601
RvY_06713-1
Tyrosine-protein kinase receptor.
    
  0.590
RvY_18554-1
Uncharacterized protein.
    
  0.523
RvY_12184-1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.512
RvY_16633-1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.512
RvY_06548-1
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.506
RvY_05718-1
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.504
RvY_01165-1
Signal transducer and activator of transcription.
     
 0.480
RvY_13907-1
Uncharacterized protein.
   
 0.468
RvY_11793
Uncharacterized protein.
    
 0.464
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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