STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_02380-1Fucosidase_C domain-containing protein; Belongs to the glycosyl hydrolase 29 family. (512 aa)    
Predicted Functional Partners:
RvY_08459-1
Alpha-galactosidase.
   
 
 0.730
RvY_10229-1
Alpha-galactosidase.
   
 
 0.730
RvY_15992-1
Treh acid.
    
  0.653
RvY_15994-1
Treh acid.
    
  0.653
RvY_14339-1
Glyco_hydro_32C domain-containing protein.
     
 0.605
RvY_14335-1
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.605
RvY_02248-1
Uncharacterized protein.
    
 0.538
RvY_02249-1
Uncharacterized protein.
    
 0.538
RvY_02258-1
Uncharacterized protein.
    
 0.538
RvY_05528-1
Uncharacterized protein.
    
 0.538
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.