STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_02872-1L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family. (451 aa)    
Predicted Functional Partners:
RvY_08537-1
Uncharacterized protein.
   
 0.714
RvY_01325-1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.686
RvY_12789-1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.686
RvY_09511-1
Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.665
RvY_15537-1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
    
 0.650
RvY_08867-1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.630
RvY_11361-1
Uncharacterized protein.
   
 
 0.627
RvY_13655-1
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.623
RvY_18985-1
Glucosylceramidase.
    
 0.614
RvY_09798-1
DAO domain-containing protein.
   
 
  0.612
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (22%) [HD]