STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_03219-1Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
RvY_14886-1
NYD-SP28 domain-containing protein.
  
  
 0.725
RvY_18372-1
BBS1 domain-containing protein.
      
 0.555
RvY_05062-1
Uncharacterized protein.
      
 0.554
RvY_14242-1
Clu domain-containing protein.
      
 0.553
RvY_07260-1
Uncharacterized protein.
  
   
 0.543
RvY_18668-1
GAS domain-containing protein.
  
   
 0.501
RvY_13776-1
GAS domain-containing protein.
  
   
 0.495
RvY_17324-1
t-SNARE coiled-coil homology domain-containing protein.
      
 0.467
RvY_04687-1
Uncharacterized protein.
   
  
 0.453
RvY_15949-1
Aminotran_1_2 domain-containing protein.
     
 0.438
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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