STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_00791-1Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
RvY_05718-1
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.681
RvY_09008-1
Uncharacterized protein.
     
 0.580
RvY_00790-1
Uncharacterized protein.
  
     0.531
RvY_04160-1
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.517
RvY_06449-1
Uncharacterized protein.
    
 0.517
RvY_09306-1
Thymidylat_synt domain-containing protein.
    
  0.508
RvY_13205-1
Uncharacterized protein.
   
 
  0.485
RvY_04368-1
Uncharacterized protein.
   
 
  0.477
RvY_08316-1
Uncharacterized protein.
   
 
  0.477
RvY_08785-1
Uncharacterized protein.
   
 
  0.477
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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