STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_01190-1Tetraspanin. (253 aa)    
Predicted Functional Partners:
RvY_04731-1
Uncharacterized protein.
     
 0.645
RvY_09646-1
Tetraspanin.
     
0.612
RvY_06275-1
Tetraspanin.
     
0.609
RvY_09753-1
Uncharacterized protein.
    
  0.601
RvY_14292-2
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.601
RvY_06713-1
Tyrosine-protein kinase receptor.
    
  0.590
RvY_12184-1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.587
RvY_16633-1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.587
RvY_07847
Uncharacterized protein.
   
 0.560
RvY_07847-3
Uncharacterized protein.
   
 0.560
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.