STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_02139-1Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
RvY_18946-1
Uncharacterized protein.
  
 
 0.795
RvY_00061-1
Uncharacterized protein.
   
 
 0.728
RvY_01758
WD_REPEATS_REGION domain-containing protein.
   
 
 0.709
RvY_01758-1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.709
RvY_12362-1
Uncharacterized protein.
    
 
 0.693
RvY_09456-1
ANK_REP_REGION domain-containing protein.
    
 
 0.673
RvY_07260-1
Uncharacterized protein.
   
 
 0.653
RvY_09964-1
Uncharacterized protein.
    
 
 0.584
RvY_09965-1
Uncharacterized protein.
    
 
 0.584
RvY_09947-1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.580
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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