STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_03212-1Uncharacterized protein. (404 aa)    
Predicted Functional Partners:
RvY_15938-1
Uncharacterized protein.
    
 0.905
RvY_04770-1
Uncharacterized protein.
    
 0.889
RvY_09961-1
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.881
RvY_15599-1
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.879
RvY_09226-1
Malic enzyme.
    
 0.864
RvY_17462-1
Uncharacterized protein.
  
 0.798
RvY_02675-1
Pyruvate carboxyltransferase domain-containing protein.
  
 
 0.773
RvY_05085-1
Transket_pyr domain-containing protein.
  
 
 0.771
RvY_15021-1
Aspartate aminotransferase.
     
 0.770
RvY_18960-1
Aspartate aminotransferase.
     
 0.770
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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