RvY_02332-1 protein (Ramazzottius varieornatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

RvY_02332-1

Uncharacterized protein. (282 aa)

Predicted Functional Partners:

RvY_05606-1

0.636

RvY_06007-1

0.636

RvY_11517-1

0.636

RvY_13452-1

0.636

RvY_11216-1

0.589

RvY_13596-1

0.589

RvY_02138-1

0.583

RvY_00400-1

0.583

RvY_08212-1

0.583

RvY_12992-1

0.583

Your Current Organism:

Ramazzottius varieornatus

NCBI taxonomy Id: 947166
Other names: R. varieornatus

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RvY_00400-1	RvY_02332-1	A0A1D1UIY2	A0A1D1UUH3	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_00400-1	RvY_05606-1	A0A1D1UIY2	A0A1D1UYN6	Uncharacterized protein.	Uncharacterized protein.	0.766
RvY_00400-1	RvY_06007-1	A0A1D1UIY2	A0A1D1V2J0	Uncharacterized protein.	Uncharacterized protein.	0.765
RvY_00400-1	RvY_11517-1	A0A1D1UIY2	A0A1D1VGC9	Uncharacterized protein.	Uncharacterized protein.	0.750
RvY_00400-1	RvY_13452-1	A0A1D1UIY2	A0A1D1VPR0	Uncharacterized protein.	Uncharacterized protein.	0.770
RvY_02138-1	RvY_02332-1	A0A1D1UIS1	A0A1D1UUH3	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_02138-1	RvY_05606-1	A0A1D1UIS1	A0A1D1UYN6	Uncharacterized protein.	Uncharacterized protein.	0.765
RvY_02138-1	RvY_06007-1	A0A1D1UIS1	A0A1D1V2J0	Uncharacterized protein.	Uncharacterized protein.	0.768
RvY_02138-1	RvY_11517-1	A0A1D1UIS1	A0A1D1VGC9	Uncharacterized protein.	Uncharacterized protein.	0.758
RvY_02138-1	RvY_13452-1	A0A1D1UIS1	A0A1D1VPR0	Uncharacterized protein.	Uncharacterized protein.	0.773
RvY_02332-1	RvY_00400-1	A0A1D1UUH3	A0A1D1UIY2	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_02332-1	RvY_02138-1	A0A1D1UUH3	A0A1D1UIS1	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_02332-1	RvY_05606-1	A0A1D1UUH3	A0A1D1UYN6	Uncharacterized protein.	Uncharacterized protein.	0.636
RvY_02332-1	RvY_06007-1	A0A1D1UUH3	A0A1D1V2J0	Uncharacterized protein.	Uncharacterized protein.	0.636
RvY_02332-1	RvY_08212-1	A0A1D1UUH3	A0A1D1VD88	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_02332-1	RvY_11216-1	A0A1D1UUH3	A0A1D1VJS0	Uncharacterized protein.	Uncharacterized protein.	0.589
RvY_02332-1	RvY_11517-1	A0A1D1UUH3	A0A1D1VGC9	Uncharacterized protein.	Uncharacterized protein.	0.636
RvY_02332-1	RvY_12992-1	A0A1D1UUH3	A0A1D1VTX0	Uncharacterized protein.	Uncharacterized protein.	0.583
RvY_02332-1	RvY_13452-1	A0A1D1UUH3	A0A1D1VPR0	Uncharacterized protein.	Uncharacterized protein.	0.636
RvY_02332-1	RvY_13596-1	A0A1D1UUH3	A0A1D1VNE5	Uncharacterized protein.	Uncharacterized protein.	0.589