STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_04503-1N-acetyltransferase domain-containing protein. (235 aa)    
Predicted Functional Partners:
RvY_09579-1
Uncharacterized protein.
   
 
 0.997
RvY_00230-1
N-acetyltransferase domain-containing protein.
   
 
 0.996
RvY_14016-1
Uncharacterized protein.
   
 0.966
RvY_08024-1
Uncharacterized protein.
   
 
 0.884
RvY_19215-1
CBFD_NFYB_HMF domain-containing protein.
    
 0.831
RvY_12912-1
Uncharacterized protein.
    
   0.820
RvY_02793-1
Uncharacterized protein.
    
 0.805
RvY_15407-1
Ribosomal_L23eN domain-containing protein.
   
   0.792
RvY_19359-1
Uncharacterized protein.
   
   0.786
RvY_11015-1
Arrestin_C domain-containing protein.
   
 
  0.760
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
Server load: low (18%) [HD]