STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05525-1Fork-head domain-containing protein. (412 aa)    
Predicted Functional Partners:
RvY_16817-1
Uncharacterized protein.
    
 0.850
RvY_00883-1
Fork-head domain-containing protein.
  
0.831
RvY_12619-1
Uncharacterized protein.
     
 0.770
RvY_07472-1
Uncharacterized protein.
    
 0.755
RvY_03684-1
GOLD domain-containing protein.
    
 0.751
RvY_08211-1
Protein kinase domain-containing protein.
    
 0.722
RvY_07595-1
Uncharacterized protein.
   
 0.719
RvY_11702-1
SIRT1.
    
 0.713
RvY_15064-1
NAD-dependent protein deacylase; NAD-dependent lysine demalonylase, desuccinylase and deglutarylase that specifically removes malonyl, succinyl and glutaryl groups on target proteins. Has weak NAD-dependent protein deacetylase activity; however this activity may not be physiologically relevant in vivo.
    
 0.711
RvY_01165-1
Signal transducer and activator of transcription.
   
 0.708
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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