STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05550Chitin-binding type-2 domain-containing protein. (343 aa)    
Predicted Functional Partners:
RvY_07193-1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.622
RvY_06243-1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.622
RvY_07472-1
Uncharacterized protein.
   
  0.598
RvY_02045-1
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.586
RvY_07802-1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.575
RvY_10750-1
Guanylate cyclase domain-containing protein.
     
 0.570
RvY_07642-1
Thioredoxin domain-containing protein.
    
 0.554
RvY_00821-1
Glutathione synthetase.
     
 0.456
RvY_06639-1
Glutathione synthetase.
     
 0.456
RvY_09706-1
Glutaredoxin domain-containing protein.
     
 0.436
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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