STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05896Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
RvY_13942-1
Beta-hexosaminidase.
  
 0.770
RvY_05967-1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.759
RvY_04795-1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.759
RvY_18985-1
Glucosylceramidase.
  
 
 0.750
RvY_08459-1
Alpha-galactosidase.
     
 0.730
RvY_10229-1
Alpha-galactosidase.
     
 0.730
RvY_13576-1
Mannose-6-phosphate isomerase.
    
 0.726
RvY_03631-1
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
    
 0.722
RvY_00067-1
Beta-galactosidase.
   
 0.711
RvY_10003-1
Beta-galactosidase.
   
 0.711
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.