STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05943-1PAW domain-containing protein. (341 aa)    
Predicted Functional Partners:
RvY_10044-1
LisH domain-containing protein.
    
 0.819
RvY_00385-1
Uncharacterized protein.
    
 0.807
RvY_02775-1
Uncharacterized protein.
    
 0.807
RvY_15822-1
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.713
RvY_00564-1
Ubiquitin-like domain-containing protein.
    
 0.704
RvY_00236
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.702
RvY_00236-2
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.702
RvY_05167-1
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.702
RvY_13151-1
Uncharacterized protein.
   
 0.665
RvY_15013-1
RING-type domain-containing protein.
   
 0.665
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.