STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05046-1Glyco_trans_4-like_N domain-containing protein. (502 aa)    
Predicted Functional Partners:
RvY_05189-1
NTP_transferase domain-containing protein.
  
 0.936
RvY_10973-1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 0.926
RvY_13445-1
Glyco_tran_28_C domain-containing protein.
    
 0.914
RvY_18479-1
Uncharacterized protein.
   
 
 0.913
RvY_07171-1
OTU domain-containing protein.
    
 0.899
RvY_14648-1
Uncharacterized protein.
    
 0.897
RvY_14689-1
Uncharacterized protein.
    
 0.897
RvY_18642-1
Uncharacterized protein.
    
 0.858
RvY_13023-1
NTP_transferase domain-containing protein.
  
 0.849
RvY_14214-1
Aamy domain-containing protein.
   
 0.847
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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