STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_06126-1Uncharacterized protein. (2113 aa)    
Predicted Functional Partners:
RvY_05498-1
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.991
RvY_10809-1
ANK_REP_REGION domain-containing protein.
    
 0.957
RvY_10524-1
Protein kinase C.
   
 0.933
RvY_12835-1
Uncharacterized protein.
    
0.893
RvY_02447-1
Uncharacterized protein.
    
 0.889
RvY_04671-1
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.888
RvY_11568-1
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.862
RvY_19319-1
Phosphoinositide phospholipase C.
   
 0.854
RvY_07389-1
Guanylate kinase-like domain-containing protein.
    
 0.851
RvY_09143
Phosphoinositide phospholipase C.
   
 0.849
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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