STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_06443-1AB hydrolase-1 domain-containing protein. (381 aa)    
Predicted Functional Partners:
RvY_08662
PNPLA domain-containing protein.
    
 0.847
RvY_08662-1
PNPLA domain-containing protein.
    
 0.847
RvY_11482
Uncharacterized protein.
    
 0.843
RvY_11482-2
Uncharacterized protein.
    
 0.807
RvY_14969-1
SCP2 domain-containing protein.
  
 0.768
RvY_15754
Uncharacterized protein.
  
 0.768
RvY_15755-1
SCP2 domain-containing protein.
  
 0.768
RvY_02509-1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.744
RvY_05711-1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.744
RvY_08741-1
Uncharacterized protein.
   
 0.730
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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