STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05012-1Alba domain-containing protein. (299 aa)    
Predicted Functional Partners:
RvY_07498-1
Uncharacterized protein.
    
 0.990
RvY_10175-1
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.990
RvY_15768-1
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.990
RvY_05993-1
Uncharacterized protein.
   
 0.988
RvY_10438-1
Uncharacterized protein.
    
 0.980
RvY_15196-1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
     
 0.978
RvY_02988-1
Uncharacterized protein.
   
 0.952
RvY_02655-1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.944
RvY_14697-1
Alba domain-containing protein.
    
 0.884
RvY_08081
Uncharacterized protein.
   
 0.874
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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