STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_04755-16PF2K domain-containing protein. (494 aa)    
Predicted Functional Partners:
RvY_08128-1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.947
RvY_15952-1
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
   
 0.944
RvY_16010-1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.939
RvY_18926-1
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
   
 
 0.933
RvY_14634-1
Uncharacterized protein.
  
 
 0.932
RvY_02228-1
Phosphoserine aminotransferase.
    
 0.922
RvY_18697-1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.891
RvY_04713-1
Phosphotransferase.
   
 0.888
RvY_09383
Uncharacterized protein.
  
 
  0.880
RvY_15542-1
Triosephosphate isomerase.
    
 0.879
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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