STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_06165-3Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (377 aa)    
Predicted Functional Partners:
RvY_09955-1
PAPS_reduct domain-containing protein.
  
 0.993
RvY_12370-1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
 
   
 0.953
RvY_12959-1
Tr-type G domain-containing protein.
 
      0.900
RvY_13967-1
Tr-type G domain-containing protein.
 
  
   0.876
RvY_12619-1
Uncharacterized protein.
     
 0.871
RvY_07499-1
tRNA-synt_1e domain-containing protein.
    
 0.815
RvY_14634-1
Uncharacterized protein.
     
 0.814
RvY_09740-1
Uncharacterized protein.
 
 
 0.793
RvY_07726-1
Uncharacterized protein.
  
 
 0.773
RvY_09970-1
Uncharacterized protein.
  
 
 0.773
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.