STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_06974-1NRBF2_MIT domain-containing protein. (262 aa)    
Predicted Functional Partners:
RvY_13793-1
Uncharacterized protein.
    
 0.997
RvY_15521-1
Uncharacterized protein.
    
 0.997
RvY_17043-1
ATG11 domain-containing protein.
    
 0.995
RvY_01115-1
Uncharacterized protein.
   
 0.994
RvY_17746
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.992
RvY_17746-1
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.992
RvY_09734-1
Uncharacterized protein.
     
 0.872
RvY_08136-1
Uncharacterized protein.
     
 0.868
RvY_08574
Protein kinase domain-containing protein.
    
 0.813
RvY_08574-3
Protein kinase domain-containing protein.
    
 0.813
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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