STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_05783-2Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
RvY_01212-1
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
 0.997
RvY_12865-1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.947
RvY_08685
Epimerase domain-containing protein.
  
 0.933
RvY_08685-1
Epimerase domain-containing protein.
  
 0.933
RvY_04795-1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.911
RvY_05967-1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 0.906
RvY_00782-1
Uncharacterized protein.
  
 
 0.821
RvY_10163-1
UTP--glucose-1-phosphate uridylyltransferase.
  
 
 0.796
RvY_07490-1
GFO_IDH_MocA domain-containing protein.
  
 0.736
RvY_01512-1
SH3 domain-containing protein.
     
 0.712
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.