STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_08512ABC transporter domain-containing protein. (345 aa)    
Predicted Functional Partners:
RvY_07437-3
ABC transporter domain-containing protein.
  
0.781
RvY_07437
ABC transporter domain-containing protein.
  
0.777
RvY_07437-2
Uncharacterized protein.
   
0.762
RvY_14676-1
Uncharacterized protein.
    
 0.664
RvY_03230-1
Uncharacterized protein.
    
 0.624
RvY_09955-1
PAPS_reduct domain-containing protein.
     
 0.589
RvY_11515-1
Uncharacterized protein.
     
 0.546
RvY_14250-1
Uncharacterized protein.
     
 0.546
RvY_14214-1
Aamy domain-containing protein.
   
 
  0.545
RvY_00074
ABC transmembrane type-1 domain-containing protein.
   
 0.488
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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