STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_08655-1AAA domain-containing protein; Belongs to the AAA ATPase family. (371 aa)    
Predicted Functional Partners:
RvY_07843-1
UBX domain-containing protein.
   
 0.981
RvY_10530-1
Uncharacterized protein.
    
 0.910
RvY_15388-1
RING-type domain-containing protein.
    
 0.905
RvY_02751-1
DUF4097 domain-containing protein.
    
 0.895
RvY_10376-1
Uncharacterized protein.
    
 0.893
RvY_08098-1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
     
 0.865
RvY_14979-1
Uncharacterized protein.
   
 0.822
RvY_08518-1
WD_REPEATS_REGION domain-containing protein.
 
 
 
 0.818
RvY_10269-1
Uncharacterized protein.
    
 0.817
RvY_15802-1
Uncharacterized protein.
   
 0.806
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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