STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_07147-1TPR_REGION domain-containing protein. (330 aa)    
Predicted Functional Partners:
RvY_12993-1
HSP90-2.
    
 0.995
RvY_00296-1
CS domain-containing protein.
    
 0.964
RvY_05327-1
HSP90-1.
    
 0.960
RvY_03446-1
TPR_REGION domain-containing protein.
    
 
 0.593
RvY_19218-1
TPR_REGION domain-containing protein.
    
 
 0.590
RvY_13486-1
Uncharacterized protein.
      
 0.551
RvY_13580-1
Peptidylprolyl isomerase.
   
  
 0.508
RvY_15626-1
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
 
      0.456
RvY_08009-1
J domain-containing protein.
    
 
 0.445
RvY_10279-1
Uncharacterized protein.
    
 
 0.444
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.