STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_08963Uncharacterized protein; Belongs to the peptidase C14A family. (535 aa)    
Predicted Functional Partners:
RvY_07472-1
Uncharacterized protein.
    
 0.990
RvY_05643-1
CARD domain-containing protein.
    
 0.972
RvY_09456-1
ANK_REP_REGION domain-containing protein.
    
 0.860
RvY_14888-1
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.801
RvY_17688-1
Uncharacterized protein.
    
 0.756
RvY_11235-1
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.736
RvY_10800-1
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.736
RvY_11236-1
Cystatin domain-containing protein; Belongs to the cystatin family.
    
 0.736
RvY_14541-1
Uncharacterized protein.
    
 0.712
RvY_00612-1
Uncharacterized protein.
   
  0.700
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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