STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_07953-1Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
RvY_17820-1
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.791
RvY_10524-1
Protein kinase C.
    
 0.761
RvY_05054-1
Non-specific serine/threonine protein kinase.
     
 0.757
RvY_14415-1
Uncharacterized protein; Belongs to the cyclin family.
     
 0.754
RvY_06205-1
AMPKBI domain-containing protein.
    
 0.751
RvY_14542-1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
0.749
RvY_10058-1
Protein kinase domain-containing protein.
    
 0.737
RvY_16379-1
RRM domain-containing protein.
   
 0.736
RvY_14517-1
Uncharacterized protein.
    
 0.713
RvY_09316
Uncharacterized protein.
    
 0.657
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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