STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_08970-1Uncharacterized protein. (565 aa)    
Predicted Functional Partners:
RvY_05718-1
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.681
RvY_18950-1
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
  
  0.617
RvY_06514-1
Aminotran_1_2 domain-containing protein.
   
  
 0.566
RvY_18181-1
S-adenosylmethionine decarboxylase proenzyme.
    
 
 0.563
RvY_17843-1
DUF5009 domain-containing protein.
   
  
 0.558
RvY_05769-1
dUTPase domain-containing protein.
     
 0.545
RvY_09306-1
Thymidylat_synt domain-containing protein.
    
  0.508
RvY_18438-1
Uncharacterized protein.
 
    
 0.502
RvY_04159
Thymidine kinase.
     
 0.460
RvY_04159-2
Thymidine kinase.
     
 0.460
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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