STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_07924-1WD_REPEATS_REGION domain-containing protein. (333 aa)    
Predicted Functional Partners:
RvY_05401-1
Uncharacterized protein.
    
 0.650
RvY_05573-1
Uncharacterized protein.
    
 0.650
RvY_08439
Uncharacterized protein.
    
 0.650
RvY_08073-1
Uncharacterized protein.
    
 0.650
RvY_08439-2
Uncharacterized protein.
    
 0.650
RvY_08439-5
Uncharacterized protein.
    
 0.650
RvY_04209-1
Uncharacterized protein.
    
   0.617
RvY_08267-1
PAPA-1 domain-containing protein.
      
 0.436
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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