STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_10668-1S1 motif domain-containing protein. (332 aa)    
Predicted Functional Partners:
RvY_00579-1
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
RvY_02206-1
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
RvY_06963-1
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
 0.999
RvY_09141-1
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
RvY_08968-1
Tr-type G domain-containing protein.
   
 0.999
RvY_09491-1
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.999
RvY_08726-1
W2 domain-containing protein.
   
 0.999
RvY_09844-1
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.999
RvY_14075-1
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.999
RvY_16941-1
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.999
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.