STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_09332-1V-SNARE coiled-coil homology domain-containing protein. (348 aa)    
Predicted Functional Partners:
RvY_01927-1
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.979
RvY_05197-1
Uncharacterized protein.
    
 0.917
RvY_02281-1
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.893
RvY_02592-1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.877
RvY_15977-1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.877
RvY_16385-1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.876
RvY_01360-1
t-SNARE coiled-coil homology domain-containing protein.
    
 0.855
RvY_06665-1
Uncharacterized protein.
     
 0.855
RvY_05218-1
t-SNARE coiled-coil homology domain-containing protein.
   
 0.855
RvY_09722-1
t-SNARE coiled-coil homology domain-containing protein.
    
 0.855
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.